Commit graph

35 commits

Author SHA1 Message Date
e4e9b94cfe fix: align test assertion with rollback behavior
The upsert rolls back the entire transaction on partial failure,
so new_pub_count and link count should be consistent (both 0),
not assuming the first publication survived.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 23:16:07 +01:00
83e0407491 " " 2026-03-01 23:11:52 +01:00
c7d170a202 db tets fix 2026-03-01 23:07:49 +01:00
79f3e41471 fix: resolve CI lint and docs build failures
Apply ruff formatting to 3 files and add missing package-lock.json for docs/website.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-01 23:00:31 +01:00
a5165dc3ba after audit 2026-03-01 18:14:22 +01:00
c0e66c509f style: fix ruff lint and format issues across service modules
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-27 16:24:36 +01:00
3fd9132176 refactor: fix naming, remove duplicate code from decomposition
- Rename _int_or_default → int_or_default (public API, was using private convention)
- Extract shared pdf_queue utilities (utcnow, event_row, queued_job, status constants) to pdf_queue_common.py to avoid circular imports
- Consolidate _effective_request_delay_seconds into queue_runner.py with explicit floor parameter
- Update tests to match new function locations and names

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-27 16:07:24 +01:00
f11947aad2 refactor: extract helpers from oversized router and scheduler files
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-27 15:41:23 +01:00
55315299c7 commit 2026-02-27 15:22:12 +01:00
b701583716 refactor: decompose scholars service and pdf_queue into focused modules
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-27 14:39:12 +01:00
6379c97e90 decompose application.py into enrichment, scholar processing, run completion 2026-02-27 14:19:39 +01:00
9a7fa5004e refactor: extract pagination engine and publication upsert from ingestion service
Split app/services/ingestion/application.py (2,955 lines) into three
focused modules:

- page_fetch.py (219 lines): PageFetcher class for single-page fetch,
  parse-or-layout-error handling, and retry with backoff
- pagination.py (486 lines): PaginationEngine class for multi-page
  orchestration, loop state management, and short-circuit detection
- publication_upsert.py (239 lines): module-level functions for
  resolve_publication, upsert_profile_publications, and all
  find/create/update helpers

Also fixes two external import paths in portability/ that incorrectly
sourced normalize_title and build_publication_url from application.py
instead of fingerprints.py.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-27 13:47:23 +01:00
92395b2b4b Initial release prep 2026-02-27 10:46:05 +01:00
ac002131d6 fix: resolve remaining ruff lint and mypy type errors
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-26 22:58:55 +01:00
bf04c77aa9 ci: add ruff linting and mypy type checking
Add ruff and mypy to dev dependencies with configuration in pyproject.toml.
Add a lint CI job that runs ruff check, ruff format --check, and mypy.
Auto-fix import sorting and formatting across the codebase. Exclude
alembic/versions from linting (auto-generated migrations). Ignore B008
(FastAPI Depends pattern) and RUF001 (unicode in user-facing strings).

21 ruff lint errors and 50 mypy errors remain for manual review.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-26 22:11:41 +01:00
fa56168fb1 refactor: reduce log noise, improve event naming and console readability
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-26 22:05:18 +01:00
db0ac6a228 refactor: migrate all remaining logging to structured_log, remove boilerplate helpers
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-26 21:59:34 +01:00
6b47b56867 refactor: add structured_log utility to eliminate logging boilerplate
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-26 21:31:32 +01:00
3d4cfeff1a Intermediate commit 2026-02-26 16:09:57 +01:00
0e9e49df16 temp commit 2026-02-26 12:54:19 +01:00
1c01b29be7 s 2026-02-22 16:23:35 +01:00
5499904cef release prep 2026-02-21 18:36:27 +01:00
e3f0d63fec Big changes 2026-02-21 17:33:05 +01:00
4240ad38e2 m 2026-02-20 23:29:44 +01:00
01454162bb harden domain architecture and add lazy Crossref+Unpaywall PDF enrichment with publications workspace refactor 2026-02-20 22:56:52 +01:00
7f7a8ce2b0 feat: refactor backend services and add direct PDF links, import/export, and dashboard sync 2026-02-19 23:45:52 +01:00
ba7976d935 m 2026-02-19 22:50:22 +01:00
1ce85304e3 remove legacy in-memory search state fallback 2026-02-19 22:31:26 +01:00
d7404abf18 arden scrape safety telemetry and polish run state UX 2026-02-19 21:59:36 +01:00
110e246a1c Added run state front end support
Updated scholars layout to match dashboard
2026-02-19 20:07:08 +01:00
ae2ca8f149 feat: production-harden app and finalize merge-ready UX/theme baseline
- complete tokenized theme preset system and admin style guide visibility
- refine dashboard layout/scroll behavior and shared async/request UI states
- add user nav-visibility settings across API, migration, and frontend stores
- harden security headers/CSP handling and related test coverage
- enforce CI repository hygiene + frontend contract/theme/build quality gates
- update docs/env references and make migration smoke test head-aware
2026-02-19 15:43:20 +01:00
ab1d29b203 streamlined 2026-02-17 21:59:41 +01:00
441676be27 test 2026-02-17 20:24:12 +01:00
f71841e922 removed old UI 2026-02-17 15:21:08 +01:00
4433d7d2c4 First product 2026-02-17 14:51:25 +01:00