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ci: add ruff linting and mypy type checking

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Add ruff and mypy to dev dependencies with configuration in pyproject.toml.
Add a lint CI job that runs ruff check, ruff format --check, and mypy.
Auto-fix import sorting and formatting across the codebase. Exclude
alembic/versions from linting (auto-generated migrations). Ignore B008
(FastAPI Depends pattern) and RUF001 (unicode in user-facing strings).

21 ruff lint errors and 50 mypy errors remain for manual review.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
This commit is contained in:
Justin Visser 2026-02-26 22:11:41 +01:00
parent 399276ea69
commit bf04c77aa9
137 changed files with 3066 additions and 1900 deletions
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5
tests/integration/test_data_repair_jobs.py
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@ -160,10 +160,7 @@ async def _assert_apply_effects(
)
baseline_completed = await _count_rows(
db_session,
sql=(
"SELECT count(*) FROM scholar_profiles "
"WHERE id = :scholar_profile_id AND baseline_completed = false"
),
sql=("SELECT count(*) FROM scholar_profiles WHERE id = :scholar_profile_id AND baseline_completed = false"),
params={"scholar_profile_id": scholar_profile_id},
)
publication_count = await _count_rows(