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ci: add ruff linting and mypy type checking

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Add ruff and mypy to dev dependencies with configuration in pyproject.toml.
Add a lint CI job that runs ruff check, ruff format --check, and mypy.
Auto-fix import sorting and formatting across the codebase. Exclude
alembic/versions from linting (auto-generated migrations). Ignore B008
(FastAPI Depends pattern) and RUF001 (unicode in user-facing strings).

21 ruff lint errors and 50 mypy errors remain for manual review.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
This commit is contained in:
Justin Visser 2026-02-26 22:11:41 +01:00
parent 399276ea69
commit bf04c77aa9
137 changed files with 3066 additions and 1900 deletions
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10
app/services/domains/portability/publication_import.py
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@ -6,8 +6,8 @@ from sqlalchemy import select
from sqlalchemy.ext.asyncio import AsyncSession
from app.db.models import Publication, ScholarProfile, ScholarPublication
from app.services.domains.ingestion.application import build_publication_url, normalize_title
from app.services.domains.doi.normalize import normalize_doi
from app.services.domains.ingestion.application import build_publication_url, normalize_title
from app.services.domains.portability.normalize import (
_normalize_citation_count,
_normalize_optional_text,
@ -22,9 +22,7 @@ async def _find_publication_by_cluster(
*,
cluster_id: str,
) -> Publication | None:
result = await db_session.execute(
select(Publication).where(Publication.cluster_id == cluster_id)
)
result = await db_session.execute(select(Publication).where(Publication.cluster_id == cluster_id))
return result.scalar_one_or_none()
@ -33,9 +31,7 @@ async def _find_publication_by_fingerprint(
*,
fingerprint_sha256: str,
) -> Publication | None:
result = await db_session.execute(
select(Publication).where(Publication.fingerprint_sha256 == fingerprint_sha256)
)
result = await db_session.execute(select(Publication).where(Publication.fingerprint_sha256 == fingerprint_sha256))
return result.scalar_one_or_none()