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ci: add ruff linting and mypy type checking

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Add ruff and mypy to dev dependencies with configuration in pyproject.toml.
Add a lint CI job that runs ruff check, ruff format --check, and mypy.
Auto-fix import sorting and formatting across the codebase. Exclude
alembic/versions from linting (auto-generated migrations). Ignore B008
(FastAPI Depends pattern) and RUF001 (unicode in user-facing strings).

21 ruff lint errors and 50 mypy errors remain for manual review.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
This commit is contained in:
Justin Visser 2026-02-26 22:11:41 +01:00
parent 399276ea69
commit bf04c77aa9
137 changed files with 3066 additions and 1900 deletions
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13
alembic/versions/20260224_0018_add_openalex_enriched_to_publications.py
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@ -5,26 +5,29 @@ Revises: fa0c5e3262d5
Create Date: 2026-02-24 19:10:00.000000
"""
from collections.abc import Sequence
from alembic import op
import sqlalchemy as sa
from alembic import op
# revision identifiers, used by Alembic.
revision: str = '20260224_0018'
down_revision: str | Sequence[str] | None = 'fa0c5e3262d5'
revision: str = "20260224_0018"
down_revision: str | Sequence[str] | None = "fa0c5e3262d5"
branch_labels: str | Sequence[str] | None = None
depends_on: str | Sequence[str] | None = None
def upgrade() -> None:
# ### commands auto generated by Alembic - please adjust! ###
op.add_column('publications', sa.Column('openalex_enriched', sa.Boolean(), server_default=sa.text('false'), nullable=False))
op.add_column(
"publications", sa.Column("openalex_enriched", sa.Boolean(), server_default=sa.text("false"), nullable=False)
)
# ### end Alembic commands ###
def downgrade() -> None:
# ### commands auto generated by Alembic - please adjust! ###
op.drop_column('publications', 'openalex_enriched')
op.drop_column("publications", "openalex_enriched")
# ### end Alembic commands ###